p53motif Database
Filter by HGNC/Gene Symbol gene:
Filter by Chrom:
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chr1
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chr3
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chr20
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chrX
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Filter by p53RE Start:
Filter by p53RE End:
p53 binding Information
Oberved p53 binding in ANY dataset:
YES
NO
ANY
p53 binding in Riege et al 2022:
ANY
YES
NO
p53 binding in Verfaillie et al 2016:
ANY
YES
NO
p53 binding in Nguyen et al 2018:
ANY
YES
NO
p53 binding in ReMap 2022
ANY
YES
NO
Chromatin Information
Is the p53RE in an ENCODE candidate CRE region:
YES
NO
ANY
Filter by cCRE Type:
CA
CA-CTCF
CA-H3K4me3
CA-TF
dELS
pELS
PLS
TF
Is the p53RE in an ENCODE DNAse Hypersensitive Site (DHS):
YES
NO
ANY
Filter by chromHMM term:
Acet1
Acet2
Acet3
Acet4
Acet5
Acet6
Acet7
Acet8
BivProm1
BivProm2
BivProm3
BivProm4
DNase1
EnhA1
EnhA10
EnhA11
EnhA12
EnhA13
EnhA14
EnhA15
EnhA16
EnhA17
EnhA18
EnhA19
EnhA2
EnhA20
EnhA3
EnhA4
EnhA5
EnhA6
EnhA7
EnhA8
EnhA9
EnhWk1
EnhWk2
EnhWk3
EnhWk4
EnhWk5
EnhWk6
EnhWk7
EnhWk8
GapArtf1
GapArtf2
GapArtf3
HET1
HET2
HET3
HET4
HET5
HET6
HET7
HET8
HET9
PromF1
PromF2
PromF3
PromF4
PromF5
PromF6
PromF7
Quies1
Quies2
Quies3
Quies4
Quies5
ReprPC1
ReprPC2
ReprPC3
ReprPC4
ReprPC5
ReprPC6
ReprPC7
ReprPC8
ReprPC9
TSS1
TSS2
Tx1
Tx2
Tx3
Tx4
Tx5
Tx6
Tx7
Tx8
TxEnh1
TxEnh2
TxEnh3
TxEnh4
TxEnh5
TxEnh6
TxEnh7
TxEnh8
TxEx1
TxEx2
TxEx3
TxEx4
TxWk1
TxWk2
znf1
znf2
Filter by chromHMM group:
acetylations
bivalent promoters
DNase
enhancers
exon
HET
others
polycomb repressed
promoters
quescient
transcribed and enhancer
transcription
TSS
weak enhancers
weak transcription
znf
3D Genome Interactions
Is the p53RE in a GeneHancer 3D interaction:
YES
NO
ANY
Is the p53RE in an Activity By Contact (ABC) 3D interaction:
YES
NO
ANY
Is the p53RE in an MCF10A Capture MicroC 3D interaction:
YES
NO
ANY
Is the p53RE in an HCT116 PCHiC 3D interaction:
YES
NO
ANY
Genomic Variation
Does the p53RE have a record in clinVar:
YES
NO
ANY
Does the p53RE have a record in dbSNP156:
YES
NO
ANY
Genomic Variables
Intergenic or Intragenic?
INTRAGENIC
INTERGENIC
ANY
In Repetitive Element?
YES
NO
ANY
Is the p53RE in a blacklist region:
YES
NO
ANY
Does the p53RE contain a CG site for potential methylation:
YES
NO
ANY
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Query and download other datasets based on p53RE filters
ClinVar Data
dbSNP Data
ENCODE DHS Data
RepeatMasker Data
Riege p53 Meta Data
ReMap2022 p53 Data
ABC 3D Genome Data
GeneHancer Data
MCF10A MicroC Data
HCT116 pcHiC Data
Download Filtered Data clinvar